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1616
17- /* NAVIGATION BAR */
17+ /* NAVIGATION BAR (same as homepage) */
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20- padding : 15 px 40px ;
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37- }
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41- width : auto;
42- }
43-
44- nav .brand .title {
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46- font-weight : 700 ;
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33+ nav .logo img {
34+ height : 45px ;
35+ cursor : pointer;
4836 }
4937
5038 nav ul {
6654 color : # 003d99 ;
6755 }
6856
69- /* HERO SECTION */
70- .hero {
57+ /* PAGE HEADER */
58+ .header-block {
7159 text-align : center;
72- padding : 120px 20px 90 px ;
60+ padding : 120px 20px 80 px ;
7361 background : # f7f9fc ;
7462 }
7563
76- .hero h1 {
64+ .header-block h1 {
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78- font-weight : 700 ;
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67+ font-weight : 700 ;
8068 color : # 111 ;
8169 }
8270
83- .hero p {
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85- color : # 666 ;
86- max-width : 700 px ;
71+ .header-block p {
72+ font-size : 1.2 em ;
73+ color : # 555 ;
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8775 margin-left : auto;
8876 margin-right : auto;
8977 }
9078
91- /* MAIN CONTENT */
92- section {
93- max-width : 900px ;
94- margin : 60px auto;
95- padding : 0 25px ;
96- }
97-
79+ /* SECTION TITLE */
9880 h2 .section-title {
99- font-size : 1.8em ;
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10181 text-align : center;
102- margin-bottom : 30px ;
103- }
104-
105- p {
106- font-size : 1.05rem ;
107- color : # 444 ;
82+ margin-top : 70px ;
10883 margin-bottom : 25px ;
84+ font-size : 1.9em ;
85+ font-weight : 600 ;
10986 }
11087
111- /* GRID CARDS */
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119-
120- .card {
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133- }
134-
135- .card h3 {
136- margin-top : 0 ;
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88+ /* CONTENT SECTIONS */
89+ .content-block {
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13995 }
14096
141- .placeholder {
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14298 width : 100% ;
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99+ height : 220 px ;
100+ background : # e9eef5 ;
145101 border-radius : 8px ;
146- margin-bottom : 12 px ;
102+ margin : 30 px 0 ;
147103 display : flex;
148- justify-content : center;
149104 align-items : center;
150- color : # 777 ;
105+ justify-content : center;
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151108 font-style : italic;
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154110
155- /* FOOTER */
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158- padding : 40px 20px ;
159- text-align : center;
160- font-size : 0.9em ;
161- color : # 777 ;
162- margin-top : 60px ;
111+ /* PUBLICATION LIST */
112+ .pub-section h3 {
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115+ color : # 003d99 ;
116+ }
117+
118+ .pub-section ul {
119+ margin-top : 10px ;
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163121 }
164122 </ style >
165123</ head >
168126
169127 <!-- NAVIGATION BAR -->
170128 < nav >
171- < div class ="brand ">
172- < img src ="images/Lab_logo3.png " alt ="BioIntelligence Lab Logo ">
173- < div class ="title "> BioIntelligence Lab</ div >
129+ < div class ="logo ">
130+ < a href ="index.html ">
131+ < img src ="https://github.com/BioIntelligence-Lab/BioIntelligence-Lab.github.io/blob/main/images/Lab_logo3.png?raw=true " alt ="Lab Logo ">
132+ </ a >
174133 </ div >
175134
176135 < ul >
177- < li > < a href ="index.html " > Home </ a > </ li >
178- < li > < a href ="#overview " > Overview </ a > </ li >
179- < li > < a href ="#areas " > Research Areas </ a > </ li >
180- < li > < a href ="#publications " > Publications </ a > </ li >
136+ < li > < a href ="index.html#research " > Research </ a > </ li >
137+ < li > < a href ="index.html#tools " > Software </ a > </ li >
138+ < li > < a href ="index.html#people " > People </ a > </ li >
139+ < li > < a href ="index.html#contact " > Contact </ a > </ li >
181140 </ ul >
182141 </ nav >
183142
184- <!-- HERO -->
185- < section class ="hero ">
143+ <!-- HEADER -->
144+ < section class ="header-block ">
186145 < h1 > Fundamental AI Research</ h1 >
187- < p > Advancing the foundations of artificial intelligence to understand complex biological systems.</ p >
188- </ section >
189-
190- <!-- OVERVIEW -->
191- < section id ="overview ">
192- < h2 class ="section-title "> Overview</ h2 >
193- < p >
194- The Fundamental AI vertical develops core algorithms that enable new forms of scientific discovery
195- in medicine and biology. Our work spans lifelong learning (< strong > ShELL</ strong > ), counterfactual modeling,
196- AI safety and trustworthiness, and the development of autonomous agentic systems capable of performing
197- scientific reasoning tasks.
198- </ p >
199146 < p >
200- These research programs drive both algorithmic innovation and biological insight, forming the foundation
201- upon which our biomedical discoveries and computational tools are built.
147+ Advancing the foundations of Artificial Intelligence through safety, trustworthiness, human–AI ecosystems,
148+ and multi-agent autonomy. Our work pushes beyond application-driven AI to explore how intelligent systems
149+ learn, collaborate, and evolve over time.
202150 </ p >
203151 </ section >
204152
205- <!-- RESEARCH AREAS -->
206- < section id ="areas ">
207- < h2 class ="section-title "> Research Areas</ h2 >
153+ <!-- AI SAFETY -->
154+ < h2 class ="section-title "> AI Safety & Trustworthiness</ h2 >
208155
209- < div class ="cards ">
156+ < div class ="content-block ">
157+ < p >
158+ This sub-area focuses on ensuring AI systems are reliable, transparent, and equitable.
159+ We investigate algorithmic bias, uncertainty modeling, robustness to real-world variation,
160+ security vulnerabilities, demographic leakage in foundation models, and safe use of generative AI
161+ in clinical decision-making.
162+ </ p >
210163
211- < div class ="card ">
212- < div class ="placeholder "> Image Placeholder</ div >
213- < h3 > ShELL — Lifelong Learning</ h3 >
214- < p > Developing AI systems that continuously accumulate experience across tasks and domains, inspired by human learning.</ p >
215- </ div >
164+ < div class ="placeholder-img "> [ Placeholder: Diagram on AI Safety / Bias / Robustness ]</ div >
165+
166+ < div class ="pub-section ">
167+ < h3 > Representative Publications</ h3 >
168+ < ul >
169+ < li > Beheshtian et al., Radiology, 2022 — Bias in pediatric bone age prediction.</ li >
170+ < li > Bachina et al., Radiology, 2023 — Coarse race labels masking underdiagnosis patterns.</ li >
171+ < li > Santomartino et al., Radiology: AI, 2024 — Stress testing and robustness evaluation.</ li >
172+ < li > Trang et al., Emergency Radiology, 2024 — Sociodemographic bias in ICH detection.</ li >
173+ < li > Kavandi et al., AJR, 2024 — Predictability of demographics from chest radiographs.</ li >
174+ < li > Santomartino et al., Radiology, 2024 — Bias in NLP tools for radiology reports.</ li >
175+ < li > Garin, Parekh, Sulam, Yi et al., Nature Medicine, 2023 — Need for demographic transparency.</ li >
176+ < li > Yi et al., Radiology, 2025 — Best practices for evaluating algorithmic bias.</ li >
177+ < li > Zheng, Jacobs, Parekh et al., arXiv, 2024 — Demographic predictability in CT embeddings.</ li >
178+ < li > Zheng, Jacobs, Braverman, Parekh et al., arXiv, 2025 — Adversarial debiasing in CT models.</ li >
179+ < li > Kulkarni et al., MIDL, 2024 — Hidden-in-plain-sight imperceptible bias attacks.</ li >
180+ </ ul >
181+ </ div >
182+ </ div >
216183
217- < div class ="card ">
218- < div class ="placeholder "> Image Placeholder</ div >
219- < h3 > Counterfactual Modeling</ h3 >
220- < p > Building models that simulate alternative biological trajectories to understand disease evolution and treatment response.</ p >
221- </ div >
184+ <!-- HUMAN–AI ECOSYSTEM -->
185+ < h2 class ="section-title "> Human–AI Ecosystem Modeling</ h2 >
222186
223- < div class ="card ">
224- < div class ="placeholder "> Image Placeholder</ div >
225- < h3 > AI Safety & Trustworthiness</ h3 >
226- < p > Studying bias, robustness, data shifts, and vulnerabilities in clinical AI systems to ensure safe deployment.</ p >
227- </ div >
187+ < div class ="content-block ">
188+ < p >
189+ We study how humans and AI systems can learn from each other, share experience, collaborate across institutions,
190+ and form collective intelligence. This includes the development of SheLL (Shared Experience Lifelong Learning),
191+ multi-agent reasoning frameworks, and the foundations needed to build autonomous research workflows.
192+ </ p >
228193
229- < div class ="card ">
230- < div class ="placeholder "> Image Placeholder</ div >
231- < h3 > Autonomous Agentic Systems</ h3 >
232- < p > Creating AI agents capable of reasoning, planning, and executing scientific workflows autonomously.</ p >
233- </ div >
194+ < div class ="placeholder-img "> [ Placeholder: SheLL / Multi-Agent Collaboration Diagram ]</ div >
234195
196+ < div class ="pub-section ">
197+ < h3 > Representative Publications</ h3 >
198+ < ul >
199+ < li > Uwaeze, Kulkarni, Braverman, Jacobs, Parekh, ICCV 2025 — Counterfactual augmentation for equitable learning.</ li >
200+ < li > Kulkarni et al., MIDL 2024 — Stealth bias attacks informing ecosystem resilience.</ li >
201+ <!-- Add more as papers emerge -->
202+ </ ul >
235203 </ div >
236- </ section >
237-
238- <!-- PUBLICATIONS -->
239- < section id ="publications ">
240- < h2 class ="section-title "> Representative Publications</ h2 >
241- < p > We will add the curated publication list from your Trustworthy AI, ShELL, and Agentic AI work here.</ p >
242-
243- < ul >
244- < li > < em > Hidden in Plain Sight: Undetectable Adversarial Bias Attacks</ em > </ li >
245- < li > < em > Sociodemographic Bias in a Commercial AI Model for ICH Detection</ em > </ li >
246- < li > < em > Generative Counterfactual Augmentation for Bias Mitigation</ em > </ li >
247- < li > < em > Demographic Predictability in 3D CT Foundation Embeddings</ em > </ li >
248- < li > < em > Evaluating Robustness of Deep Learning Bone Age Models</ em > </ li >
249- </ ul >
250- </ section >
251-
252- <!-- FOOTER -->
253- < footer >
254- © 2025 BioIntelligence Lab · UTHealth Houston< br >
255- Contact: vishwa.s.parekh@uth.tmc.edu
256- </ footer >
204+ </ div >
257205
258206</ body >
259- </ html >
207+ </ html >
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