diff --git a/.github/workflows/foss.yaml b/.github/workflows/foss.yaml
index 8463e740..cfc9c1cf 100644
--- a/.github/workflows/foss.yaml
+++ b/.github/workflows/foss.yaml
@@ -57,7 +57,17 @@ jobs:
         uses: ./.github/platform_environment_setup/ubuntu
 
       - name: Set Bazel version
-        run: echo ${{ matrix.bazel_version }} >> test/foss/templates/.bazelversion
+        run: echo ${{ matrix.bazel_version }} > .bazelversion
+
+      - name: Print versions
+        run: |
+          bazel version
+          which bazel
+          CodeChecker version
+          echo "[NOTE]: CodeChecker may find different analyzer binaries" \
+               "when invoking directly, or in bazel's sandbox environment!" \
+               "Be sure to double check during debugging."
+          CodeChecker analyzers
 
       - name: Run Test On Opensource Projects
         working-directory: test
@@ -83,7 +93,17 @@ jobs:
         uses: ./.github/platform_environment_setup/rhel9
 
       - name: Set Bazel version
-        run: echo ${{ matrix.bazel_version }} >> test/foss/templates/.bazelversion
+        run: echo ${{ matrix.bazel_version }} > .bazelversion
+
+      - name: Print versions
+        run: |
+          bazel version
+          which bazel
+          CodeChecker version
+          echo "[NOTE]: CodeChecker may find different analyzer binaries" \
+               "when invoking directly, or in bazel's sandbox environment!" \
+               "Be sure to double check during debugging."
+          CodeChecker analyzers
 
       - name: Run Test On Opensource Projects
         working-directory: test
diff --git a/test/common/base.py b/test/common/base.py
index 5e335a2e..0b25d59c 100644
--- a/test/common/base.py
+++ b/test/common/base.py
@@ -135,10 +135,14 @@ def run_command(
             cwd=working_dir,
         ) as process:
             stdout, stderr = process.communicate()
+            stdout = stdout.decode("utf-8")
+            stderr = stderr.decode("utf-8")
+            logging.debug("stdout: %s", stdout)
+            logging.debug("stderr: %s", stderr)
             return (
                 process.returncode,
-                f"stdout: {stdout.decode('utf-8')}",
-                f"stderr: {stderr.decode('utf-8')}",
+                f"stdout: {stdout}",
+                f"stderr: {stderr}",
             )
 
     @classmethod
diff --git a/test/foss/templates/.bazelversion b/test/foss/templates/.bazelversion
deleted file mode 100644
index f22d756d..00000000
--- a/test/foss/templates/.bazelversion
+++ /dev/null
@@ -1 +0,0 @@
-6.5.0
diff --git a/test/foss/yaml-cpp/init.sh b/test/foss/yaml-cpp/init.sh
index 6321f8dc..671bc8ec 100755
--- a/test/foss/yaml-cpp/init.sh
+++ b/test/foss/yaml-cpp/init.sh
@@ -14,12 +14,16 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+set -x
+
 git clone --recurse https://github.com/jbeder/yaml-cpp.git test-proj
 cd test-proj
 git checkout yaml-cpp-0.7.0
 
 # This file must be in the root of the project to be analyzed for bazelisk to work
-cp ../../templates/.bazelversion ./.bazelversion
+bazelversion="../../../../.bazelversion"
+[ -f $bazelversion ] && cp $bazelversion .
+cat .bazelversion
 
 # Add codechecker to the project
 cat <<EOF >> BUILD.bazel
@@ -52,3 +56,7 @@ EOF
 
 # Add codechecker_bazel repo to WORKSPACE
 cat ../../templates/WORKSPACE.template >> WORKSPACE
+
+# Check
+bazel version
+which bazel
diff --git a/test/foss/zlib-module/init.sh b/test/foss/zlib-module/init.sh
index 080fe172..49e52774 100644
--- a/test/foss/zlib-module/init.sh
+++ b/test/foss/zlib-module/init.sh
@@ -14,12 +14,17 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+set -x
+
 git clone --recurse https://github.com/madler/zlib.git test-proj
 cd test-proj
 git checkout 5a82f71ed1dfc0bec044d9702463dbdf84ea3b71
 
 # This file must be in the root of the project to be analyzed for bazelisk to work
-cp ../../templates/.bazelversion ./.bazelversion
+bazelversion="../../../../.bazelversion"
+[ -f $bazelversion ] && cp $bazelversion .
+cat .bazelversion
+
 # Add codechecker to the project
 cat <<EOF >> BUILD.bazel
 #-------------------------------------------------------
@@ -51,3 +56,7 @@ EOF
 echo "common --enable_bzlmod" > .bazelrc
 # Add codechecker_bazel repo MODULE.bazel
 cat ../../templates/MODULE.template >> MODULE.bazel
+
+# Check
+bazel version
+which bazel
diff --git a/test/foss/zlib/init.sh b/test/foss/zlib/init.sh
index ccdb0fe5..773cd75a 100644
--- a/test/foss/zlib/init.sh
+++ b/test/foss/zlib/init.sh
@@ -14,12 +14,16 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+set -x
+
 git clone --recurse https://github.com/madler/zlib.git test-proj
 cd test-proj
 git checkout 5a82f71ed1dfc0bec044d9702463dbdf84ea3b71
 
 # This file must be in the root of the project to be analyzed for bazelisk to work
-cp ../../templates/.bazelversion ./.bazelversion
+bazelversion="../../../../.bazelversion"
+[ -f $bazelversion ] && cp $bazelversion .
+cat .bazelversion
 
 # Add codechecker to the project
 cat <<EOF >> BUILD.bazel
@@ -52,3 +56,7 @@ EOF
 
 # Add codechecker_bazel repo to WORKSPACE
 cat ../../templates/WORKSPACE.template >> WORKSPACE
+
+# Check
+bazel version
+which bazel
diff --git a/test/unit/external_repository/test_external_repo.py b/test/unit/external_repository/test_external_repo.py
index 0028bd3c..e6d9a570 100644
--- a/test/unit/external_repository/test_external_repo.py
+++ b/test/unit/external_repository/test_external_repo.py
@@ -53,7 +53,7 @@ def setUpClass(cls):
             logging.debug("No bazel version set, using system default")
         _, stdout, _ = cls.run_command("bazel --version")
         cls.BAZEL_VERSION = stdout.split(' ')[2].strip()
-        logging.debug("Using Bazel", cls.BAZEL_VERSION)
+        logging.debug("Using Bazel %s", cls.BAZEL_VERSION)
 
     @final
     @classmethod