software-templates/.github/workflows/update-python.yaml at main · GenomicMedLab/software-templates · GitHub

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name: Update Python template version pins
on:
  schedule:
    - cron: '0 0 1 1,7 *'
  workflow_dispatch:

env:
  PYTHON_TEMPLATE_LOCATION: "python/{{cookiecutter.project_slug}}"
  MIN_PYTHON_VERSION: "3.11"  # use minimum supported python version

permissions:
  contents: write
  pull-requests: write

jobs:
  update_ruff:
    name: Update Python Ruff version pins
    runs-on: ubuntu-latest
    steps:
      - name: Check out repository
        uses: actions/checkout@v4
        with:
          fetch-depth: 0

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: ${{ env.MIN_PYTHON_VERSION }}

      - name: Install latest Ruff
        run: python3 -m pip install ruff

      - name: Get latest ruff version
        id: ruff-version
        run: |
          echo "RUFF_VERSION=$(pip show ruff | grep 'Version' | cut -d ' ' -f 2)" >> $GITHUB_ENV

      - name: Update Ruff Version in pyproject.toml
        run: |
          sed -i "s/\"ruff==.*\"/\"ruff==${{ env.RUFF_VERSION }}\"/" ${{ env.PYTHON_TEMPLATE_LOCATION }}/pyproject.toml

      - name: Update Ruff version in .pre-commit-config.yaml
        run: |
          sed -i "s/rev: .*  # ruff version/rev: v${{ env.RUFF_VERSION }}  # ruff version/" ${{ env.PYTHON_TEMPLATE_LOCATION }}/.pre-commit-config.yaml

      - name: Create new branch, commit, and push changes
        run: |
          git config --local user.email "action@github.com"
          git config --local user.name "GitHub Action"
          if git diff --quiet; then
            echo "new_commits=false" >> $GITHUB_ENV
            exit 0
          else
            git checkout -b update-ruff-${{ env.RUFF_VERSION }}
            git add ${{ env.PYTHON_TEMPLATE_LOCATION }}/pyproject.toml ${{ env.PYTHON_TEMPLATE_LOCATION }}/.pre-commit-config.yaml
            git commit -m "Update ruff version to ${{ env.RUFF_VERSION }}"
            echo "new_commits=true" >> $GITHUB_ENV
          fi;
          git push --set-upstream origin update-ruff-${{ env.RUFF_VERSION }}

      - name: Create pull request
        if: env.new_commits == 'true'
        run: |
          gh pr create --title "style(python): update ruff to ${{ env.RUFF_VERSION }}" \
                       --body "Automatically update the Ruff version in \`pyproject.toml\` and \`.pre-commit-config.yaml\`." \
                       --base main \
                       --head update-ruff-${{ env.RUFF_VERSION }} \
                       --reviewer "jsstevenson,korikuzma" \
                       --label "priority:low"
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

  update_precommit_and_hooks:
    name: Update Python prek version pins and hooks
    runs-on: ubuntu-latest
    steps:
      - name: Check out repository
        uses: actions/checkout@v4
        with:
          fetch-depth: 0

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: ${{ env.MIN_PYTHON_VERSION }}

      - name: Install latest prek
        run: python3 -m pip install prek

      - name: Get latest prek version
        id: prek-version
        run: |
          echo "PRECOMMIT_VERSION=$(pip show prek | grep 'Version' | cut -d ' ' -f 2)" >> $GITHUB_ENV

      - name: Update prek version in pyproject.toml
        run: |
          sed -i "s/\"prek>=.*\"/\"prek>=${{ env.PRECOMMIT_VERSION }}\"/" ${{ env.PYTHON_TEMPLATE_LOCATION }}/pyproject.toml

      - name: Update min prek version requirement in .pre-commit-config.yaml
        run: |
          sed -i "s/minimum_pre_commit_version: .*/minimum_pre_commit_version: ${{ env.PRECOMMIT_VERSION }}/" ${{ env.PYTHON_TEMPLATE_LOCATION }}/.pre-commit-config.yaml

      - name: Create new branch, commit, and push changes
        run: |
          git config --local user.email "action@github.com"
          git config --local user.name "GitHub Action"
          if git diff --quiet; then
            echo "new_commits=false" >> $GITHUB_ENV
            exit 0
          else
            git checkout -b update-precommit-${{ env.PRECOMMIT_VERSION }}
            git add ${{ env.PYTHON_TEMPLATE_LOCATION }}/pyproject.toml ${{ env.PYTHON_TEMPLATE_LOCATION }}/.pre-commit-config.yaml
            git commit -m "Update precommit to ${{ env.PRECOMMIT_VERSION }}"
            echo "new_commits=true" >> $GITHUB_ENV
          fi;
          git push --set-upstream origin update-precommit-${{ env.PRECOMMIT_VERSION }}

      - name: Create pull request
        if: env.new_commits == 'true'
        run: |
          gh pr create --title "cicd(python): update precommit to ${{ env.PRECOMMIT_VERSION }}" \
                       --body "Automatically update the prek version in \`pyproject.toml\` and \`.pre-commit-config.yaml\`." \
                       --base main \
                       --head update-precommit-${{ env.PRECOMMIT_VERSION }} \
                       --reviewer "jsstevenson,korikuzma" \
                       --label "priority:low"
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

  update_precommit_hooks:
    name: Update Python pre-commit-hooks version pins
    runs-on: ubuntu-latest
    steps:
      - name: Check out repository
        uses: actions/checkout@v4
        with:
          fetch-depth: 0

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: ${{ env.MIN_PYTHON_VERSION }}

      - name: Get latest pre-commit-hooks version
        run: |
          latest_tag=$(curl -s https://api.github.com/repos/pre-commit/pre-commit-hooks/releases | jq -r '.[0].tag_name')
          echo "PRECOMMIT_HOOKS_VERSION=$latest_tag" >> $GITHUB_ENV

      - name: Update pre-commit-hooks version in .pre-commit-config.yaml
        run: |
          sed -i "s/rev: .*  # pre-commit-hooks version/rev: ${{ env.PRECOMMIT_HOOKS_VERSION }}  # pre-commit-hooks version/" ${{ env.PYTHON_TEMPLATE_LOCATION }}/.pre-commit-config.yaml

      - name: Create new branch, commit, and push changes
        run: |
          git config --local user.email "action@github.com"
          git config --local user.name "GitHub Action"
          if git diff --quiet; then
            echo "new_commits=false" >> $GITHUB_ENV
            exit 0
          else
            git checkout -b update-precommit-hooks-${{ env.PRECOMMIT_HOOKS_VERSION }}
            git add ${{ env.PYTHON_TEMPLATE_LOCATION }}/.pre-commit-config.yaml
            git commit -m "Update pre-commit-hooks version to ${{ env.PRECOMMIT_HOOKS_VERSION }}"
            echo "new_commits=true" >> $GITHUB_ENV
          fi;
          git push --set-upstream origin update-precommit-hooks-${{ env.PRECOMMIT_HOOKS_VERSION }}

      - name: Create pull request
        if: env.new_commits == 'true'
        run: |
          gh pr create --title "cicd(python): update pre-commit-hooks to ${{ env.PRECOMMIT_HOOKS_VERSION }}" \
                       --body "Automatically update the pre-commit-hooks version in \`.pre-commit-config.yaml\`." \
                       --base main \
                       --head update-precommit-hooks-${{ env.PRECOMMIT_HOOKS_VERSION }} \
                       --reviewer "jsstevenson,korikuzma" \
                       --label "priority:low"
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}