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<!doctype html>
<html>
<head>
<title>Mullins Molecular Retrovirology Lab </title>
</head>
<h1>Mullins Molecular Retrovirology Lab</h1>
Department of Microbiology, School of Medicine, University of Washington
<hr>
<article>
<h2>About the Mullins Lab </h2>
<p> After more than 4 decades of research in virology, the lab of James I Mullins has closed down as Jim retired in early 2025.
During his career, the Mullins Lab used a variety of techniques to understand the implications of HIV's extraordinary genetic diversity
for the pathogenesis of AIDS, and apply this information to the development of more effective therapies and vaccines.
Jim continues to work from home wrapping up a number of projects and writing publications. </p>
</article>
<hr>
<article>
<h2>Publications </h2>
<h3>Recent</h3>
<li>Jeffrey C Furlong, Peter D Darley, Wenjie Deng, James I Mullins, Roger E Bumgarner (2024). Phylobook: a tool for display, clade annotation and
extraction of sequences from molecular phylogenies. Biotechniques 2024 May 3. (<a href="http://ncbi.nlm.nih.gov/pubmed/38700279">pubmed</a>)</li>
<h3>Full list </h3>
</article>
<hr>
<h2>Contact</h2>
<p>Jim insert desired contact info here</p>
<article>
<article>
<hr>
<h2>Software & Tools</h2>
<b>NOTE The most popular web-based software tools have been migrated to the Fred Hutch and are maintained by Wenjie Deng (wdeng2@fredhutch.org) </b>
<ul>
<li><a href="https://github.com/mullinslab">GitHub</a></li>
<li><a href="https://divein.fredhutch.org/">Divein - a web service that performs automated maximum likelihood phylogenetic analyses of nucleotide and amino acid sequences</a></li>
<li><a href="https://primerdb.fredhutch.org/">PrimerdB - a web database application to store and search the primers used in the lab for HIV research.</a></li>
<li><a href="https://mullinslab.microbiol.washington.edu/hiris/">HIRIS</a></li>
<li><a href="https://mullinslab.microbiol.washington.edu/HMA/">HMA Subtyping Kit</a></li>
<li><a href="https://mullinslab.microbiol.washington.edu/isdb/">ISDB</a></li>
<li><a href="https://mullinslab.microbiol.washington.edu/tcozy/">TCozy</a></li>
<li><a href="https://viroverse.fredhutch.org/">Viroverse</a></li>
</article>
</ul>
</nav>
</body></html>