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Merge pull request #174 from konard/issue-170-d462ee89bc6a
fix(hooks): auto-stage .gemini, .claude, .codex directories on commit
2 parents 908f3d6 + 23277c7 commit e3dd79a

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.githooks/pre-commit

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@@ -15,6 +15,15 @@ done < <(
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-print0
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)
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# CHANGE: auto-stage AI agent config directories (.gemini, .claude, .codex)
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# WHY: ensures AI session context is always included in commits without manual git add
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# REF: issue-170
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for ai_dir in .gemini .claude .codex; do
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if [ -d "$ai_dir" ]; then
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git add -A -- "$ai_dir"
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fi
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done
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1827
MAX_BYTES=$((99 * 1000 * 1000))
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too_large=()
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.gitignore

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@@ -23,4 +23,3 @@ yarn-error.log*
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pnpm-debug.log*
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reports/
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.idea
26-
.claude
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@@ -0,0 +1,49 @@
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#!/usr/bin/env bash
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set -euo pipefail
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# Test that the pre-commit hook logic correctly stages AI config directories
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echo "=== Testing AI directory auto-staging logic ==="
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REPO_ROOT="$(git rev-parse --show-toplevel)"
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cd "$REPO_ROOT"
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# Create test AI directories with test files
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for ai_dir in .gemini .claude .codex; do
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mkdir -p "$ai_dir"
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echo "test-content-$(date +%s)" > "$ai_dir/test-file.txt"
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done
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echo "Created test files:"
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ls -la .gemini/test-file.txt .claude/test-file.txt .codex/test-file.txt
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# Check gitignore status
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echo ""
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echo "=== Checking gitignore status ==="
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for ai_dir in .gemini .claude .codex; do
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if git check-ignore -q "$ai_dir/test-file.txt" 2>/dev/null; then
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echo "IGNORED: $ai_dir (this is a problem!)"
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else
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echo "NOT IGNORED: $ai_dir (good - can be tracked)"
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fi
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done
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# Simulate the auto-staging logic from the pre-commit hook
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echo ""
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echo "=== Simulating auto-staging ==="
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for ai_dir in .gemini .claude .codex; do
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if [ -d "$ai_dir" ]; then
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git add -A -- "$ai_dir"
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echo "Staged: $ai_dir"
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fi
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done
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echo ""
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echo "=== Staged files ==="
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git diff --cached --name-only | grep -E "^\.(gemini|claude|codex)/" || echo "(none found)"
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# Clean up - unstage the test files
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git reset HEAD -- .gemini .claude .codex 2>/dev/null || true
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rm -rf .gemini/test-file.txt .claude/test-file.txt .codex/test-file.txt
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echo ""
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echo "=== Test complete ==="

packages/app/eslint.effect-ts-check.config.mjs

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@@ -134,6 +134,10 @@ const restrictedSyntaxBaseNoServiceFactory = [
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]
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136136
export default tseslint.config(
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{
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name: "effect-ts-compliance-ignore-shell-tests",
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ignores: ["tests/hooks/**"]
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},
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{
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name: "effect-ts-compliance-check",
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files: ["src/**/*.ts", "scripts/**/*.ts", "tests/**/*.ts"],
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// CHANGE: add tests for pre-commit hook AI directory auto-staging and setup script
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// WHY: guarantees that .gemini, .claude, .codex are auto-staged and setup configures hooks correctly
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// REF: issue-170
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// PURITY: SHELL (tests filesystem + git operations in isolated temp repos)
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import { execFileSync } from "node:child_process"
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import fs from "node:fs"
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import os from "node:os"
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import path from "node:path"
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import { fileURLToPath } from "node:url"
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import { afterEach, beforeEach, describe, expect, it } from "vitest"
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const currentDir = path.dirname(fileURLToPath(import.meta.url))
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const repoRoot = path.resolve(currentDir, "../../../..")
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// Resolve absolute binary paths to satisfy sonarjs/no-os-command-from-path
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const GIT_BIN = execFileSync("/usr/bin/which", ["git"], { encoding: "utf8" }).trim()
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const NODE_BIN = process.execPath
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/**
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* Creates an isolated git repo in a temp directory for testing
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*
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* @returns path to the temp repo root
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* @pure false — creates temp directory and initializes git repo
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*/
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const createTempRepo = (): string => {
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const tmpDir = fs.mkdtempSync(path.join(os.tmpdir(), "hook-test-"))
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execFileSync(GIT_BIN, ["init"], { cwd: tmpDir, stdio: "pipe" })
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execFileSync(GIT_BIN, ["config", "user.email", "test@test.com"], { cwd: tmpDir, stdio: "pipe" })
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execFileSync(GIT_BIN, ["config", "user.name", "Test"], { cwd: tmpDir, stdio: "pipe" })
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fs.writeFileSync(path.join(tmpDir, "README.md"), "init")
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execFileSync(GIT_BIN, ["add", "README.md"], { cwd: tmpDir, stdio: "pipe" })
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execFileSync(GIT_BIN, ["commit", "-m", "init"], { cwd: tmpDir, stdio: "pipe" })
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return tmpDir
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}
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/**
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* Runs the AI directory staging logic (mirrors pre-commit hook behavior) in a given repo
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*
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* @param cwd - the git repo directory
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* @pure false — stages files via git add
42+
*/
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const runAiDirStaging = (cwd: string): void => {
44+
for (const aiDir of [".gemini", ".claude", ".codex"]) {
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const dirPath = path.join(cwd, aiDir)
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if (fs.existsSync(dirPath) && fs.statSync(dirPath).isDirectory()) {
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execFileSync(GIT_BIN, ["add", "-A", "--", aiDir], { cwd, stdio: "pipe" })
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}
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}
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}
51+
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/**
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* Returns list of staged file names in a given repo
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*
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* @param cwd - the git repo directory
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* @returns array of staged file paths
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* @pure false — reads git index
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*/
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const getStagedFiles = (cwd: string): ReadonlyArray<string> => {
60+
const output = execFileSync(GIT_BIN, ["diff", "--cached", "--name-only"], {
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cwd,
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encoding: "utf8"
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}).trim()
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return output ? output.split("\n") : []
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}
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/**
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* Copies setup script into a temp repo and runs it
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*
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* @param repoDir - target git repo
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* @pure false — copies file, executes script, modifies git config
72+
*/
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const runSetupScript = (repoDir: string): void => {
74+
const scriptsDir = path.join(repoDir, "scripts")
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fs.mkdirSync(scriptsDir, { recursive: true })
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const srcScript = path.resolve(repoRoot, "scripts/setup-pre-commit-hook.js")
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fs.copyFileSync(srcScript, path.join(scriptsDir, "setup-pre-commit-hook.js"))
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execFileSync(NODE_BIN, ["scripts/setup-pre-commit-hook.js"], {
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cwd: repoDir,
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encoding: "utf8",
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stdio: "pipe"
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})
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}
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/**
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* Reads the generated hook content from a temp repo
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*
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* @param repoDir - target git repo
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* @returns hook file content
90+
* @pure false — reads filesystem
91+
*/
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const readGeneratedHook = (repoDir: string): string =>
93+
fs.readFileSync(path.join(repoDir, ".githooks", "pre-commit"), "utf8")
94+
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const AI_DIR_STAGING_SNIPPET = `for ai_dir in .gemini .claude .codex; do
96+
if [ -d "$ai_dir" ]; then
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git add -A -- "$ai_dir"
98+
fi
99+
done`
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// Tests that require an isolated temp git repo
102+
describe("pre-commit hook (isolated repo)", () => {
103+
let repoDir: string
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105+
beforeEach(() => {
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repoDir = createTempRepo()
107+
})
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afterEach(() => {
109+
fs.rmSync(repoDir, { recursive: true, force: true })
110+
})
111+
112+
describe("AI directory auto-staging logic", () => {
113+
// INVARIANT: ∀ dir ∈ {.gemini, .claude, .codex}: exists(dir) → staged(dir/*)
114+
it("stages .gemini, .claude, .codex directories when they exist", () => {
115+
for (const dir of [".gemini", ".claude", ".codex"]) {
116+
fs.mkdirSync(path.join(repoDir, dir), { recursive: true })
117+
fs.writeFileSync(path.join(repoDir, dir, "config.json"), `{"dir":"${dir}"}`)
118+
}
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120+
runAiDirStaging(repoDir)
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const stagedFiles = getStagedFiles(repoDir)
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expect(stagedFiles).toContain(".gemini/config.json")
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expect(stagedFiles).toContain(".claude/config.json")
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expect(stagedFiles).toContain(".codex/config.json")
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})
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128+
// INVARIANT: ¬exists(dir) → no_error ∧ no_staging
129+
it("skips non-existent AI directories without error", () => {
130+
fs.mkdirSync(path.join(repoDir, ".gemini"), { recursive: true })
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fs.writeFileSync(path.join(repoDir, ".gemini", "settings.txt"), "test")
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runAiDirStaging(repoDir)
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const stagedFiles = getStagedFiles(repoDir)
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expect(stagedFiles).toContain(".gemini/settings.txt")
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expect(stagedFiles.some((f) => f.startsWith(".claude/"))).toBe(false)
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expect(stagedFiles.some((f) => f.startsWith(".codex/"))).toBe(false)
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})
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// INVARIANT: ∀ f ∈ dir/*: staged(f) (recursive staging)
142+
it("stages nested files within AI directories", () => {
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fs.mkdirSync(path.join(repoDir, ".claude", "memory"), { recursive: true })
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fs.writeFileSync(path.join(repoDir, ".claude", "memory", "context.md"), "# Context")
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fs.writeFileSync(path.join(repoDir, ".claude", "settings.json"), "{}")
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runAiDirStaging(repoDir)
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const stagedFiles = getStagedFiles(repoDir)
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expect(stagedFiles).toContain(".claude/memory/context.md")
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expect(stagedFiles).toContain(".claude/settings.json")
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})
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// INVARIANT: empty_dir → no_staging ∧ no_error
155+
it("handles empty AI directories gracefully", () => {
156+
fs.mkdirSync(path.join(repoDir, ".codex"), { recursive: true })
157+
158+
runAiDirStaging(repoDir)
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expect(getStagedFiles(repoDir)).toHaveLength(0)
161+
})
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})
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describe("setup-pre-commit-hook.js", () => {
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// INVARIANT: ∃ .githooks/pre-commit after setup ∧ executable(pre-commit)
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it("creates .githooks/pre-commit with correct permissions", () => {
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runSetupScript(repoDir)
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const hookPath = path.join(repoDir, ".githooks", "pre-commit")
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expect(fs.existsSync(hookPath)).toBe(true)
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const stats = fs.statSync(hookPath)
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expect(stats.mode & 0o111).toBeGreaterThan(0)
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})
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// INVARIANT: hook_content contains AI dir staging logic
177+
it("generated hook includes AI directory auto-staging for .gemini, .claude, .codex", () => {
178+
runSetupScript(repoDir)
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const hookContent = readGeneratedHook(repoDir)
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expect(hookContent).toContain(".gemini")
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expect(hookContent).toContain(".claude")
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expect(hookContent).toContain(".codex")
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expect(hookContent).toContain(AI_DIR_STAGING_SNIPPET)
185+
})
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// INVARIANT: core.hooksPath = ".githooks" after setup
188+
it("configures git core.hooksPath to .githooks", () => {
189+
runSetupScript(repoDir)
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const hooksPath = execFileSync(GIT_BIN, ["config", "core.hooksPath"], {
192+
cwd: repoDir,
193+
encoding: "utf8"
194+
}).trim()
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expect(hooksPath).toBe(".githooks")
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})
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// INVARIANT: idempotent(setup) — running twice produces same result
200+
it("is idempotent — running setup twice produces the same result", () => {
201+
runSetupScript(repoDir)
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const firstContent = readGeneratedHook(repoDir)
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runSetupScript(repoDir)
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const secondContent = readGeneratedHook(repoDir)
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expect(firstContent).toBe(secondContent)
208+
})
209+
})
210+
})
211+
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// Tests that verify the committed repo files directly (no temp repo needed)
213+
describe("committed hook files", () => {
214+
// INVARIANT: ∀ dir ∈ {.claude, .gemini, .codex}: dir ∉ gitignore_entries
215+
it(".gitignore does not ignore .claude, .gemini, or .codex directories", () => {
216+
const content = fs.readFileSync(path.resolve(repoRoot, ".gitignore"), "utf8")
217+
const lines = content.split("\n").map((line) => line.trim())
218+
219+
for (const dir of [".claude", ".gemini", ".codex"]) {
220+
expect(lines).not.toContain(dir)
221+
expect(lines).not.toContain(`${dir}/`)
222+
}
223+
})
224+
225+
// INVARIANT: .githooks/pre-commit contains AI staging logic with correct structure
226+
it("pre-commit hook has AI staging logic, correct shebang, and strict mode", () => {
227+
const content = fs.readFileSync(path.resolve(repoRoot, ".githooks/pre-commit"), "utf8")
228+
229+
expect(content).toContain(AI_DIR_STAGING_SNIPPET)
230+
expect(content.startsWith("#!/usr/bin/env bash\n")).toBe(true)
231+
expect(content).toContain("set -euo pipefail")
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})
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})

scripts/setup-pre-commit-hook.js

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#!/usr/bin/env node
22

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// CHANGE: Add repeatable pre-commit hook setup for secret auto-redaction
4-
// WHY: Keep secret scanning on every commit without one-time manual hook wiring.
3+
// CHANGE: Add repeatable pre-commit hook setup for secret auto-redaction and AI session directory staging
4+
// WHY: Keep secret scanning on every commit without one-time manual hook wiring,
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// and automatically include .gemini, .claude, .codex directories in commits.
6+
// REF: issue-170
57
// SOURCE: n/a
68
// PURITY: SHELL (git config + filesystem)
79

@@ -33,6 +35,15 @@ done < <(
3335
-print0
3436
)
3537
38+
# CHANGE: auto-stage AI agent config directories (.gemini, .claude, .codex)
39+
# WHY: ensures AI session context is always included in commits without manual git add
40+
# REF: issue-170
41+
for ai_dir in .gemini .claude .codex; do
42+
if [ -d "$ai_dir" ]; then
43+
git add -A -- "$ai_dir"
44+
fi
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done
46+
3647
MAX_BYTES=$((99 * 1000 * 1000))
3748
too_large=()
3849
@@ -59,7 +70,18 @@ bash "$REPO_ROOT/scripts/pre-commit-secret-guard.sh"
5970

6071
fs.chmodSync(hookPath, 0o755);
6172

62-
console.log(
63-
"Installed .githooks/pre-commit."
64-
);
65-
console.log("Enable it for this repository with: git config core.hooksPath .githooks");
73+
// CHANGE: automatically configure core.hooksPath so hooks are active immediately
74+
// WHY: previously required a manual step that was easy to forget, causing hooks to never run
75+
// REF: issue-170
76+
const { execFileSync } = require("node:child_process");
77+
try {
78+
execFileSync("git", ["config", "core.hooksPath", ".githooks"], {
79+
cwd: repoRoot,
80+
encoding: "utf8",
81+
stdio: ["pipe", "pipe", "pipe"],
82+
});
83+
console.log("Installed .githooks/pre-commit and configured core.hooksPath = .githooks");
84+
} catch (error) {
85+
console.log("Installed .githooks/pre-commit.");
86+
console.log("Enable it for this repository with: git config core.hooksPath .githooks");
87+
}

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