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src/AnalysisFunctions.py

Lines changed: 0 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -991,7 +991,6 @@ def number_of_puncta_per_segmented_cell_with_threshold(
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)
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else:
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if not os.path.isfile(cell_mask_file):
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print("here")
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cell_mask, pil_mask, areas, centroids = (
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self.threshold_cell_areas_3d(
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raw_cell_mask,
@@ -1001,7 +1000,6 @@ def number_of_puncta_per_segmented_cell_with_threshold(
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erosionsize=erosionsize,
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)
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)
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print(cell_mask_file)
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IO.write_tiff(
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file_path=cell_mask_file,
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volume=cell_mask,

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