diff --git a/.changeset/warm-clubs-watch.md b/.changeset/warm-clubs-watch.md
new file mode 100644
index 00000000000..471212c8e86
--- /dev/null
+++ b/.changeset/warm-clubs-watch.md
@@ -0,0 +1,5 @@
+---
+'@clerk/backend': patch
+---
+
+Fix an issue where multiple `set-cookie` headers were being dropped by the frontend API proxy.
diff --git a/packages/backend/src/__tests__/proxy.test.ts b/packages/backend/src/__tests__/proxy.test.ts
index 672aaaf32b9..93e01d5a11a 100644
--- a/packages/backend/src/__tests__/proxy.test.ts
+++ b/packages/backend/src/__tests__/proxy.test.ts
@@ -148,6 +148,22 @@ describe('proxy', () => {
       expect(body.errors[0].code).toBe('proxy_path_mismatch');
     });
 
+    it('does not follow protocol-relative paths', async () => {
+      const mockResponse = new Response('{}', { status: 200 });
+      mockFetch.mockResolvedValueOnce(mockResponse);
+
+      const request = new Request('https://example.com/__clerk//evil.com/steal');
+
+      await clerkFrontendApiProxy(request, {
+        publishableKey: 'pk_test_Y2xlcmsuZXhhbXBsZS5jb20k',
+        secretKey: 'sk_test_xxx',
+      });
+
+      // String concatenation keeps the host as FAPI, not evil.com
+      const fetchedUrl = new URL(mockFetch.mock.calls[0][0] as string);
+      expect(fetchedUrl.host).toBe('frontend-api.clerk.dev');
+    });
+
     it('forwards GET request to FAPI with correct headers', async () => {
       const mockResponse = new Response(JSON.stringify({ client: {} }), {
         status: 200,
@@ -525,6 +541,33 @@ describe('proxy', () => {
       expect(response.headers.get('Content-Type')).toBe('application/javascript');
     });
 
+    it('preserves multiple Set-Cookie headers from FAPI response', async () => {
+      const headers = new Headers();
+      headers.append('Set-Cookie', '__client=abc123; Path=/; HttpOnly; Secure');
+      headers.append('Set-Cookie', '__client_uat=1234567890; Path=/; Secure');
+      headers.append('Set-Cookie', '__session=xyz789; Path=/; HttpOnly; Secure');
+      headers.append('Content-Type', 'application/json');
+
+      const mockResponse = new Response(JSON.stringify({ client: {} }), {
+        status: 200,
+        headers,
+      });
+      mockFetch.mockResolvedValue(mockResponse);
+
+      const request = new Request('https://example.com/__clerk/v1/client');
+
+      const response = await clerkFrontendApiProxy(request, {
+        publishableKey: 'pk_test_Y2xlcmsuZXhhbXBsZS5jb20k',
+        secretKey: 'sk_test_xxx',
+      });
+
+      const setCookies = response.headers.getSetCookie();
+      expect(setCookies).toHaveLength(3);
+      expect(setCookies).toContain('__client=abc123; Path=/; HttpOnly; Secure');
+      expect(setCookies).toContain('__client_uat=1234567890; Path=/; Secure');
+      expect(setCookies).toContain('__session=xyz789; Path=/; HttpOnly; Secure');
+    });
+
     it('preserves relative Location headers', async () => {
       const mockResponse = new Response(null, {
         status: 302,
diff --git a/packages/backend/src/proxy.ts b/packages/backend/src/proxy.ts
index 7a47d2c3bf7..61e1ded3ea2 100644
--- a/packages/backend/src/proxy.ts
+++ b/packages/backend/src/proxy.ts
@@ -214,12 +214,19 @@ export async function clerkFrontendApiProxy(request: Request, options?: Frontend
     );
   }
 
-  // Derive the FAPI URL and construct the target URL
+  // Derive the FAPI URL and construct the target URL.
+  // Use string concatenation instead of `new URL(path, base)` to avoid
+  // protocol-relative resolution (e.g., "//evil.com" resolving to a different host).
   const fapiBaseUrl = fapiUrlFromPublishableKey(publishableKey);
+  const fapiHost = new URL(fapiBaseUrl).host;
   const targetPath = requestUrl.pathname.slice(proxyPath.length) || '/';
-  const targetUrl = new URL(targetPath, fapiBaseUrl);
+  const targetUrl = new URL(`${fapiBaseUrl}${targetPath}`);
   targetUrl.search = requestUrl.search;
 
+  if (targetUrl.host !== fapiHost) {
+    return createErrorResponse('proxy_request_failed', 'Resolved target does not match the expected host', 400);
+  }
+
   // Build headers for the proxied request
   const headers = new Headers();
 
@@ -239,7 +246,6 @@ export async function clerkFrontendApiProxy(request: Request, options?: Frontend
   headers.set('Clerk-Secret-Key', secretKey);
 
   // Set the host header to the FAPI host
-  const fapiHost = new URL(fapiBaseUrl).host;
   headers.set('Host', fapiHost);
 
   // Request uncompressed responses to avoid a double compression pass.
@@ -288,7 +294,11 @@ export async function clerkFrontendApiProxy(request: Request, options?: Frontend
     response.headers.forEach((value, key) => {
       const lower = key.toLowerCase();
       if (!HOP_BY_HOP_HEADERS.includes(lower) && !RESPONSE_HEADERS_TO_STRIP.includes(lower)) {
-        responseHeaders.set(key, value);
+        if (lower === 'set-cookie') {
+          responseHeaders.append(key, value);
+        } else {
+          responseHeaders.set(key, value);
+        }
       }
     });