Hello,
I am unable to install the Pfam database using the method outlined here as my systems are not setup for using the FTP protocol. Is there an https alternative? I can download the database using https connection.
Since this tool uses mmseqs, I was wondering whether the following commands will build the Pfam database used by transannot
wget https://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pfam-A.full.gz
mmseqs createdb Pfam-A.full.gz PFAMDBFULL --dbtype 1 --threads 32
Thanks
Abhijit
Hello,
I am unable to install the Pfam database using the method outlined here as my systems are not setup for using the FTP protocol. Is there an https alternative? I can download the database using https connection.
Since this tool uses mmseqs, I was wondering whether the following commands will build the Pfam database used by transannot
Thanks
Abhijit