RNAseq Pipeline – Nato Lab

Welcome! 👋
This repository hosts the RNAseq pipeline developed by the Nato Lab for differential gene expression analysis across multiple mouse strains.
If you scanned the QR code at ASHG 2025, thank you for your interest!

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🧬 About

This repository contains:

• Scripts for RNA-seq preprocessing, normalization, and DESeq2-based differential expression analysis.
• Example data and visualization scripts for DEG and interaction analysis.

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📖 Citation

If you use or refer to this pipeline, please cite it as:

Borges VM. (2025). RNAseq Pipeline – Borges Lab. GitHub repository.
Available at: https://github.com/Borges-Vini/RNAseq

Or use the following BibTeX entry:

@misc{borges2025rnaseq,
  author       = {Vinícius M. Borges},
  title        = {RNAseq Pipeline – Nato Lab},
  year         = {2025},
  publisher    = {GitHub},
  journal      = {GitHub repository},
  howpublished = {\url{https://github.com/Borges-Vini/RNAseq}},
}