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@KlugerLab

Kluger Lab

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  1. FIt-SNE FIt-SNE Public

    Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

    C++ 609 111

  2. SpectralNet SpectralNet Public

    Deep network that performs spectral clustering

    Python 330 103

  3. ALRA ALRA Public

    Imputation method for scRNA-seq based on low-rank approximation

    R 78 23

  4. GeneTrajectory GeneTrajectory Public

    R implementation of GeneTrajectory

    R 68 9

  5. t-SNE-Heatmaps t-SNE-Heatmaps Public

    Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq

    R 48 11

  6. pyFIt-SNE pyFIt-SNE Public

    Python Wrapper for FIt-SNE

    C++ 45 11

Repositories

Showing 10 of 39 repositories
  • MOSAIC Public
    KlugerLab/MOSAIC’s past year of commit activity
    HTML 1 0 0 0 Updated Mar 26, 2026
  • Locat Public

    Locat

    KlugerLab/Locat’s past year of commit activity
    Python 0 MIT 1 1 0 Updated Mar 26, 2026
  • bipca Public

    Biwhitened PCA

    KlugerLab/bipca’s past year of commit activity
    Jupyter Notebook 14 0 1 0 Updated Mar 18, 2026
  • KlugerLab/bipca-experiment’s past year of commit activity
    Python 0 0 0 0 Updated Mar 18, 2026
  • DiCoLo Public
    KlugerLab/DiCoLo’s past year of commit activity
    R 0 MIT 0 0 0 Updated Feb 12, 2026
  • KlugerLab/LocalizedMarkerDetector’s past year of commit activity
    R 1 0 1 0 Updated Feb 11, 2026
  • SORBET Public
    KlugerLab/SORBET’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Feb 11, 2026
  • Locat-paper Public

    Scripts and results used for the Locat paper

    KlugerLab/Locat-paper’s past year of commit activity
    0 MIT 0 0 0 Updated Feb 10, 2026
  • ViralDetection Public

    This pipeline processes sequencing data to identify viral integrations.

    KlugerLab/ViralDetection’s past year of commit activity
    Shell 0 0 0 0 Updated Oct 29, 2025
  • KlugerLab/DysonEqualizer’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Oct 16, 2025

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