docs: add RF3 antibody/antigen structure prediction tutorial

examples/rf3_antibody_tutorial/data/inputs/cr3022_rbd_complex.json

@@ -0,0 +1,22 @@
+[
+  {
+    "name": "cr3022_rbd_complex",
+    "components": [
+      {
+        "seq": "QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC",
+        "msa_path": "data/msas/cr3022_vh.a3m",
+        "chain_id": "H"
+      },
+      {
+        "seq": "DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS",
+        "msa_path": "data/msas/cr3022_vl.a3m",
+        "chain_id": "L"
+      },
+      {
+        "seq": "RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF",
+        "msa_path": "data/msas/sars2_rbd.a3m",
+        "chain_id": "A"
+      }
+    ]
+  }
+]

examples/rf3_antibody_tutorial/data/inputs/nanobody_vhh.json

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+[
+  {
+    "name": "nanobody_3ogo",
+    "components": [
+      {
+        "seq": "MQVQLVESGGALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSYEDSVKGRFTISRDDARNTVYLQMNSLKPEDTAVYYCNVNVGFEYWGQGTQVTVSS",
+        "msa_path": "data/msas/nanobody_3ogo.a3m",
+        "chain_id": "A"
+      }
+    ]
+  }
+]

examples/rf3_antibody_tutorial/data/inputs/trastuzumab_fab.json

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+[
+  {
+    "name": "trastuzumab_fab",
+    "components": [
+      {
+        "seq": "EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP",
+        "msa_path": "data/msas/trastuzumab_vh.a3m",
+        "chain_id": "H"
+      },
+      {
+        "seq": "DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
+        "msa_path": "data/msas/trastuzumab_vl.a3m",
+        "chain_id": "L"
+      }
+    ]
+  }
+]