1442 Generic country Simulation

[HenrZu]

Changes and Information

Please briefly list the changes (main added features, changed items, or corrected bugs) made:

• Load contact data based on Prem et al., 2017
• Example ode_seir_contact_matrix_example.py runs a simulation for a specified country with real contact and population data
• The contact matrices are available for around 90 countries.

If need be, add additional information and what the reviewer should look out for in particular:

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Checks by code author

• Every addressed issue is linked (use the "Closes #ISSUE" keyword below)
• New code adheres to coding guidelines
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• Tests are added for new functionality and a local test run was successful (with and without OpenMP)
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• (For ABM development) Checked benchmark results and ran and posted a local test above from before and after development to ensure performance is monitored.

Checks by code reviewer(s)

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[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.39%. Comparing base (1bb1c1e) to head (df3d3d5).

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #1466   +/-   ##
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  Coverage   97.39%   97.39%           
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  Files         188      188           
  Lines       16539    16539           
=======================================
  Hits        16108    16108           
  Misses        431      431           

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[mknaranja]

Thank you. Great addition. I went through it line by line with the debugger and checked here and there also for alternative if/else. I had some small comments + one bigger one for the aggregation of age groups.

I did not check if it works with a path provided and only briefly looked at the tests.