2.3.9

• 2.3.9
  • URL decode GFF ids when loading blast/interpro/others

2.3.8

• 2.3.8
  • Fix connection closed error when loading big interproscan files

2.3.7

• 2.3.7
  • Fix loading of expression data when first column header is not empty

2.3.6

• 2.3.6
  • Fix loading of GO terms from GFF

2.3.5

• 2.3.5
  • Fix has_table() calls with recent sqlalchemy versions

2.3.4

• 2.3.4
  • Now requires biopython >=1.78
  • Fixes biopython sequence usage in recent biopython

2.3.3

• 2.3.3
  • Now requires python >= 3.6
  • Better error reporting for blast loader

2.3.2

• 2.3.2
  • Fix interproscan loader only loading the first result of XML v5
  • Fix interproscan loader failing to load IPR by name

2.3.1

• 2.3.1
  • Fix data loading in Tripal database

2.3.0

• 2.3.0
  • Fix non working --re_parent option in fasta loader
  • allow connection using a preformatted url (needed by galaxy tools using pgutil)
  • added loading of Blast and InterProScan data
  • moved chakin feature load_go to chakin load go
  • fix sequence computing when landmark sequence is available in the db
  • add more options to match features in expression matrix loader (query_type, match_on_name, re_name, skip_missing)