Oregon Health and Science University Computational Biology
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- Portland, OR
- http://www.ohsu.edu/
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- embedding-kit Public
ohsu-comp-bio/embedding-kit’s past year of commit activity - scOPE Public
scOPE learns mutation-linked expression programs from bulk RNA-seq and projects them into single-cell RNA-seq to infer per-cell mutation probabilities, revealing subclonal evolutionary structure that complements CNV analyses.
ohsu-comp-bio/scOPE’s past year of commit activity - UniVI Public
UniVI is a scalable multi-modal VAE toolkit for aligning heterogeneous single-cell datasets into a shared latent space—supporting unimodal, dual-modal, and tri-modal (and beyond) integration. It can additionally be used for cross-modal imputation, data generation of biologically-relevant synthetic samples, data denoising, and structured evaluation.
ohsu-comp-bio/UniVI’s past year of commit activity - .github Public template
ohsu-comp-bio/.github’s past year of commit activity
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