Replacing GenomicRegion from smithlab_cpp#327
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andrewdavidsmith merged 6 commits intomasterfrom Dec 22, 2025
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…h Interval6 and Interval
…ne was just after the stop site
…ing levels counter because the format used by roi has been slightly different from the general format. Also reading the input intervals from either a BED3 or BED6, depending on what the user provides
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