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Bug: joinToString misuse in SubmissionDatabaseService discards accession versions in error messages

backendrelated to the loculus backend componentrelated to the loculus backend component

bugSomething isn't workingSomething isn't working

Status: Open.

#6140 In loculus-project/loculus;

· theosanderson-agent opened on Mar 16, 2026

Separate "segment" required field from affecting length field

websiteTasks related to the web applicationTasks related to the web application

Status: Open.

#6139 In loculus-project/loculus;

· theosanderson opened on Mar 16, 2026

Get as much info from Loculus into ENA as possible

depositionrelated to ENA/INSDC depositionrelated to ENA/INSDC deposition

Status: Open.

#6138 In loculus-project/loculus;

· theosanderson opened on Mar 16, 2026

Ingest: Data from INSDC with invalid author format is parsed incorrectly, leading sequences to error

bugSomething isn't workingSomething isn't working

ingestIngest pipelineIngest pipeline

preprocessingIssues related to the preprocessing componentIssues related to the preprocessing component

Status: Open.

#6111 In loculus-project/loculus;

· anna-parker opened on Mar 11, 2026

Preprocessing: support metadata produced from generated metadata

discussionOpen questionsOpen questions

Status: Open.

#6100 In loculus-project/loculus;

· anna-parker opened on Mar 5, 2026

Clean up old taxonomy databases

github_actionsPull requests that update GitHub Actions codePull requests that update GitHub Actions code

preprocessingIssues related to the preprocessing componentIssues related to the preprocessing component

Status: Open.

#6099 In loculus-project/loculus;

· maverbiest opened on Mar 5, 2026

Integration tests are flaky

e2eE2E test relatedE2E test related

flakeFor tests that are flakyFor tests that are flaky

testsTest related issuesTest related issues

websiteTasks related to the web applicationTasks related to the web application

Status: Open.

#6096 In loculus-project/loculus;

· anna-parker opened on Mar 5, 2026

Linkouts still send us to nextclade even if there is no data resulting in an error on the page

bugSomething isn't workingSomething isn't working

websiteTasks related to the web applicationTasks related to the web application

Status: Open.

#6078 In loculus-project/loculus;

· anna-parker opened on Mar 4, 2026

Ingest should edit sequences in PROCESSED (erroring) state when upstream data changes

backendrelated to the loculus backend componentrelated to the loculus backend component

ingestIngest pipelineIngest pipeline

Status: Open.

#6072 In loculus-project/loculus;

· theosanderson-agent opened on Mar 3, 2026

website: the length and completeness fields are very large in the search bar and do not give bounds

websiteTasks related to the web applicationTasks related to the web application

Status: Open.

#6047 In loculus-project/loculus;

· anna-parker opened on Feb 26, 2026

multi-seg, multi-path: Downloading sequences in zip with files for each segment

multipath

websiteTasks related to the web applicationTasks related to the web application

Status: Open.

#6045 In loculus-project/loculus;

· anna-parker opened on Feb 26, 2026

Allow search for INSDC accessions in top-right search bar

websiteTasks related to the web applicationTasks related to the web application

Status: Open.

#6028 In loculus-project/loculus;

· emmahodcroft opened on Feb 25, 2026